Innophore
About Innophore

The search engine for the molecular world

A decade ago, our founders asked a simple question: if you can search the whole web for a phrase, why can’t you search all of nature for a function? That question became Innophore. Our Catalophore™ 3D point-cloud technology treats every protein cavity as a searchable fingerprint, so we can scan across enzymes and proteins by what they do, not just by how they look on paper. The press once called it the “Google for enzymes.” Today it is used for enzyme discovery, drug repurposing and safety screening by companies in pharma, biotech and the chemical industry.

2014Foundational Catalophore™ method published in Nature Communications
“Pharma-Oscar”Winner of the international CPhI Pharma Award & the ÖGMBT research award
HoursFrom the SARS-CoV-2 genome to flagging its main protease as a drug target
Human proteomeDruggable cavities of the whole human proteome, mapped as the Human Cavitome Atlas
Our Story

From a Nature paper to a global technology platform.

Innophore’s roots go back to the research labs of Graz, Austria. One idea has stayed the same the whole way: proteins matter, but binding sites matter even more.

2014

The “Google for enzymes”

The team publishes the foundational Catalophore™ method in Nature Communications. Austrian and international media dub it a search engine for new enzyme functions. The same year it wins the international CPhI Pharma Award, sometimes called the “Pharma-Oscar,” along with the ÖGMBT research award.

2017

Innophore GmbH is founded

Innophore spins off from the Austrian Centre for Industrial Biotechnology (acib) and the University of Graz, with support from Science Park Graz, and becomes a company in its own right: an enzyme discovery business already extending its technology toward recognizing drug side effects.

2019

Into industrial biotechnology with new and novel enzymes

Early industry partnerships follow, including a collaboration with SignalChem, as the platform reaches beyond enzyme discovery toward drug-safety questions.

2020

A pandemic stress test

Within hours of the SARS-CoV-2 genome going public, we model its main protease (Mpro) and flag it as a prime drug target, the same site antivirals like Paxlovid would later go after. Our models are downloaded tens of thousands of times, and we reach the finals of the JEDI “Billion Molecules against COVID-19” Grand Challenge.

2021

virus.watch

With the AWS Diagnostic Development Initiative, we launch virus.watch to track emerging SARS-CoV-2 variants in near real time, backed by molecular-dynamics simulation.

2022

Scaling with NVIDIA

We become one of the earliest adopters of NVIDIA BioNeMo and begin moving binding-site analysis onto GPUs. Industrial collaborations span detergents, materials and pharma, with partners including Henkel, Continental and Merck.

2023

Into pharma with DrugSolver CavitomiX

We publish our drug-repurposing and off-target pipeline in Scientific Reports, recovering known drugs as SARS-CoV-2 inhibitors purely from binding-site similarity, independent of sequence or fold.

2024

Folding the human proteome

Together with NVIDIA, we model the 3D structures of 42,042 human proteins, cutting whole-proteome modeling from over a year to about two weeks. The dataset is published in Scientific Data (Nature).

2025

CavitOmiX goes public

Our NVIDIA partnership is announced at the J.P. Morgan Healthcare Conference and CES 2025. GPU acceleration takes the platform to five million off-target predictions per second, and we launch the CavitOmiX Copilot to help catch drug-safety risks before the clinic.

Proteins matter, but binding sites matter even more.

The conviction behind every chapter
Our Vision

Turning molecular structure into useful answers.

We set out to find and develop high-value industrial and therapeutic enzymes, more efficient and environmentally friendly “green” production processes, and new biosimilars, including work on drug repurposing and side-effect prediction with our 3D point-cloud technology. We turn molecular structure into something our partners can act on, so they can catch problems with a candidate earlier, reduce side effects and bring better products to market faster.

What We Do

Each problem deserves its own solution.

Our team works closely with each client to pin down the real problem and add the right approach to their R&D pipeline.

Enzyme discovery & engineering

Finding and optimizing industrial and therapeutic enzymes. This is the work we were founded on.

Drug discovery & repurposing

Finding hidden binding-site matches across the proteome, independent of sequence or fold.

Drug-safety & off-target screening

Predicting unintended interactions before the clinic, where they are cheapest to act on.

Green chemistry

Enabling more sustainable production of high-value compounds.

In the hands of researchers. Our software, the CavitOmiX Copilot, our PyMOL plugin and Catalophore Studio, puts this technology directly into the hands of scientists.
Our Technology

Catalophore™: cavity search across entire proteomes.

The Catalophore™ point-cloud technology describes protein cavities as multidimensional point clouds, which lets us run cavity-based searches across entire proteomes, well beyond what sequence or fold comparison can show. It is the same core idea behind our Nature Communications paper a decade ago, now run at a much larger scale.

Partners & Collaborators

We work with leading partners across tech, industry and science.

From GPU vendors to global manufacturers and top research institutes, the right collaborations turn our technology into results in the real world.

Technology & cloud

Built in partnership with NVIDIA, Amazon Web Services and Google Cloud, with their scientists co-authoring the peer-reviewed publications below.

NVIDIA: Sci. Data 2024, Sci. Rep. 2023. AWS: Sci. Rep. 2022. Google: iScience 2020, Mol. Inf. 2023.

Industry & chemicals

Applied projects with partners such as Henkel (detergent enzymes), Continental (materials) and Merck, alongside leading flavor and fragrance companies.

Science & clinical research

Collaborations with Harvard Medical School, MIT, the Broad Institute, Mount Sinai, NIH/NIAID, EPFL, ShanghaiTech University and other leading institutes.

Software & platforms

Catalophore™ and CavitOmiX integrate with Schrödinger and ship as a PyMOL plugin, dropping cavity analysis into existing workflows.

And many more. Academic and research collaborators also include Forschungszentrum Jülich, Zuse Institute Berlin, FU Berlin, RWTH Aachen, Diamond Light Source, McGill University, the Vienna Scientific Cluster, the University of Graz and acib.
Our Team

An interdisciplinary team.

Innophore started with a handful of researchers in Graz. Today the team is larger and interdisciplinary: molecular biologists, biotechnologists, (bio)chemists, physicists, machine-learning experts and computer scientists working together.

Led by Dr. Christian Gruber (CEO), Dr. Georg Steinkellner (CTO), PD Dr. Bettina Nestl (COO), Prof. Karl Gruber (CSO) and Christoph Blaschitz, MSc (CFO).

Where We Are

Let’s talk.

Whether you run discovery programs, build the platforms behind them, or just want to put our technology to work, there is a way in.

San Francisco | Graz · office@innophore.com
For discovery & R&D teams

Work with us

Bring a target or a series. We’ll work out the problem and add the right method to your pipeline.

Get in touch
For platform & software partners

Explore the technology

Add point-cloud cavity analysis, AI interpretation and proteome-wide search to your environment.

See the technology